“You know that I write slowly…”

References:

1. David Chimene, Kirstie Queener, Brian Koh, M. McShane* and M. Daniele.* “Insertable Biosensors: Combining Implanted Sensing Materials with Wearable Monitors.” (Accepted at Annual Reviews in Biomedical Engineering)

2. R. Soleimani, J. Barahona, Y. Chen, Alper Bozkurt, M. Daniele, V. Pozdin and E. Lobaton.* “Deep Neural Sleep Staging: Recent Advances in Modeling and Interpretability.” Physiologia (Accepted, in press  2023)

3. S. Shastry, W. Chu, E. Barbieri, P. Greback-Clarke, W. Smith, C. Cummings, A. Minzoni, J. Pancorbo, G. Gilleskie*, K. Ritola, M. Daniele* and S. Menegatti.* “Rational design and experimental evaluation of peptide ligands for the purification of adeno-associated viruses via affinity chromatography.” Europe PMC; Biotechnology Journal, (Accepted, in press 2023).

4. Kristina R. Rivera, Robert Jarrett Bilton, Joseph Burclaff, Michael J. Czerwinski, Jintong Liu, Jessica M. Trueblood, Caroline Hinesley, Keith Alexander Breau, Shlok Joshi, Halston Deal, Vladimir A. Pozdin, Ming Yao, Amanda L. Ziegler, Anthony T. Blikslager, M. Daniele and Scott Magness.* “Hypoxia Primes Human ISCs for Interleukin-Dependent Rescue of Stem Cell Activity” (A new microphysiological system shows hypoxia primes human ISCs for interleukin-dependent rescue of stem cell activity, bioRxiv); Cellular and Molecular Gastroenterology and Hepatology, (Accepted, in press 2023).

5. W. Chu, Shriarjun Shastry, Eduardo Barbieri, Raphael Prodromou, Paul Greback-Clarke, Will Smith, Brandyn Moore, Ryan Kilgore, Christopher Cummings, Jennifer Pancorbo, Gary Gilleskie, M. Daniele* and S. Menegatti.* “Peptide ligands for the affinity purification of adeno-associated viruses from HEK 293 cell lysates.” bioRxiv; Biotechnology and Bioengineering, (Accepted, in press 2023).

6. Christopher Sharkey, Jack Twiddy, Kaila L. Peterson, Angelica F. Aroche, Stefano Menegatti* and M. Daniele.* “Towards Electrochemical Control of pH for Regeneration of Biosensors.” IEEE BIOSENSORS, pp. 1-4, (2023).

7. Junhyeong Wang, Mahshid Hosseini, Shriarjun Shastry, Eduardo Barbieri, Wenning Chu, Stefano Menegatti* and M. Daniele.* “Toward the Quantification of Adeno-Associated Virus Titer by Electrochemical Impedance Spectroscopy.” IEEE BIOSENSORS, pp. 1-4, (2023).

8. Brendan Turner, Jack Twiddy, Michael Wilkins, Srivatsan Ramesh, Katie Kilgour, Eleo Domingos, Olivia Nasrallah, Stefano Menegatti* and M. Daniele.* “Biodegradable Elastomeric Circuit Boards from Citric Acid-based Polyesters.” npj Flexible Electronics. 7 (1), 25, (2023).

9. Jiayi Yang, Praneshnandan Nithyanandam, Shreyas Kanetkar, Ki Yoon Kwon, Jinwoo Ma, Sooik Im, Ji‐Hyun Oh, Mohammad Shamsi, Michael Wilkins, Michael Daniele, Tae‐il Kim, Huu Ngoc Nguyen, Vi Khanh Truong* and M.D Dickey*. “Liquid Metal Coated Textiles with Autonomous Electrical Healing and Antibacterial Properties.” Advanced Materials Technologies. 2202183 (2023).

10. R. Prodromou, B. Moore, W. Chu, H. Deal, A. San Miguel, A.C. Brown, M. Daniele*, V. Pozdin* and S. Menegatti.* “Molecular engineering of cyclic azobenzene-peptide hybrid ligands for the purification of human blood Factor VIII via photo-affinity chromatography.” Advanced Functional Materials. 33(14), 2213881, (2023).

11. B. Turner, S. Ramesh, S. Menegatti and M. Daniele. “Resorbable Elastomers for Implantable Medical Devices: Highlights and Applications.” Polymer International (2022).

12. T. Richmond, J. Cole, G. Dangler, M. Daniele, T. Marchitto and E. Lobaton.* “Forabot: Automated Planktic Foraminifera Isolation and Imaging.” Geochemistry, Geophysics, Geosystems. e2022GC010689, (2022).

13. Devon Martin, James Reynolds, Michael Daniele,* Edgar Lobaton* and Alper Bozkurt.* “Toward Continuous Plant Bioimpedance Fitting and Parameter Estimation.” IEEE SENSORS, pp. 1-4, (2022).

14. J. Twiddy, K. Peterson, G. Maddocks, R. MacPherson, R. Pimentel, M. Yates, C. Armitano-Lago, A. Kiefer, B. Pietrosimone,* J. Franz* and M. Daniele.* “A Low-Cost, Open Source Wireless Body Area Network for Clinical Gait Rehabilitation.” IEEE SENSORS, pp. 1-4, (2022).   

15. J. Twiddy, M. Taggart, J. Reynolds, C. Sharkey, T. Rufty, E. Lobaton, A. Bozkurt and M. Daniele.* “Real-Time Monitoring of Plant Stalk Growth Using a Flexible Printed Circuit Board Sensor.” IEEE SENSORS, pp. 1-4, (2022).

16. B.H. Lee, A.F. Aroche, S. Menegatti* and M. Daniele.* “Toward an Aptasensor for Monitoring of Tacrolimus.” IEEE SENSORS, pp. 1-4, (2022).      

17. B.L. Turner, S. Ramesh, S. Menegatti* and M. Daniele.* “Towards Resorbable Elastomeric Circuit Boards for Implantable Medical Devices.” 2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), pp. 4860-4863, (2022).

18. G. Maddocks, K.L. Peterson, M.L. Downey, B.H. Lee, J. Lavoie, S. Menegatti* and M. Daniele.* “Aptasensor for Detection of Influenza-A in Human Saliva.” 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), pp. 1262-1265, (2022).

19. T. Saha, T. Songkakul, C.T. Knisley, M. Yokus, M. Daniele, M. Dickey, A. Bozkurt, O. Velev.* “Wireless wearable electrochemical sensing platform with zero-power osmotic sweat extraction for continuous lactate monitoring.” ACS Sensors. 7(7), 2037-2048, (2022).

20. S.H. Cook, J. Twiddy, N. Mahmood, K.M. Ali, M. Lubna, P. Bradford, M. Daniele and J. Gluck.* “Electrospun carbon nanotube-based scaffolds exhibit high conductivity and cytocompatibility for tissue engineering applications.” ACS Omega. 7(23), 20006-20019, (2022).

21. B. Turner, S. Ramesh, S. Menegatti and M. Daniele. “Resorbable Elastomers for Implantable Medical Devices: Highlights and Applications.” Polymer International (2022).

22. B.L. Turner, Seedevi Senevirathne, Katie Kilgour, Darragh McArt, Manus Biggs, Stefano Menegatti, and M.A. Daniele. “Ultrasound‐Powered Implants: A Critical Review of Piezoelectric Material Selection and Applications.” Advanced Healthcare Materials (2021): 2100986.

23. R. Prodromou, Kevin N. Day, Sahand Saberi‐Bosari, John D. Schneible, Matthew D. Mabe, Adriana San Miguel, M.A. Daniele, Vladimir Pozdin, and Stefano Menegatti. “Engineering Next Generation Cyclized Peptide Ligands for Light‐Controlled Capture and Release of Therapeutic Proteins.” Advanced Functional Materials (2021): 2101410.

24. Seema Nandi, Emily Mihalko, Kimberly Nellenbach, Mario Castaneda, John Schneible, Mary Harp, Halston Deal et al. “Synthetic Platelet Microgels Containing Fibrin Knob B Mimetic Motifs Enhance Clotting Responses.” Advanced Therapeutics (2021): 2100010.

25. Emily Mihalko, Megan Sandry, Nicholas Mininni, Kimberly Nellenbach, Halston Deal, Michael Daniele, Kamrouz Ghadimi, Jerrold H. Levy, and Ashley C. Brown. “Fibrin-modulating nanogels for treatment of disseminated intravascular coagulation.” Blood Advances (2021): 613-627.

26. V. Pozdin, P.D. Erb,Σ M. Downey,Σ K.R. RiveraΣ and M.A. Daniele.* “Monitoring and Controlling Perfusion in Vascularized Microphysiological Models using an Instrumented Microfluidic Manifold Device.” Sensors and Actuators A: Physical (2021): 112970.

27. Colleen Roosa, Ismaeel Muhamed, Ashlyn T. Young, Kimberly Nellenbach, M.A. Daniele, Frances S. Ligler, and Ashley C. Brown. “Synthesis of sonicated fibrin nanoparticles that modulate fibrin clot polymerization and enhance angiogenic responses.” Colloids and Surfaces B: Biointerfaces (2021): 111805.

28. Hayley Richardson, Grace Maddocks, Kaila Peterson, M. Daniele* and Spyridon Pavlidis.* “Toward Subcutaneous Electrochemical Aptasensors for Neuropeptide Y.” IEEE SENSORS , pp. 1-4, (2021).

29. M. Yokus and M.A. Daniele. “Integrated non-invasive biochemical and biophysical sensing systems for health and performance monitoring: A systems perspective.” Biosensors and Bioelectronics (2021): 113249.

30. Kentaro Hiraka, Wakako Tsugawa, Ryutaro Asano, Murat A Yokus, Kazunori Ikebukuro, Michael A Daniele, Koji Sode. “Rational design of direct electron transfer type l-lactate dehydrogenase for the development of multiplexed biosensor.” Biosensors and Bioelectronics, 176, 112933 (2021).

31. Ana Maria Gracioso Martins, Michael D Wilkins, Frances S Ligler, Michael A Daniele, Donald O Freytes. “Microphysiological System for High-Throughput Computer Vision Measurement of Microtissue Contraction.” ACS Sensors, 6(3), 985-994, (2021).+

32. Ashlyn T Young, Olivia C White, Michael A Daniele. “Rheological Properties of Coordinated Physical Gelation and Chemical Crosslinking in Gelatin Methacryloyl (GelMA) Hydrogels.” Macromolecular Bioscience, 20(12) 2000183 (2020).

33. Brendan L Turner, Katie M Kilgour, Sydney J Stine, Michael Daniele, Stefano Menegatti. “Dual-Affinity Ratiometric Quenching (DARQ) Assay for the Quantification of Therapeutic Antibodies in CHO-S Cell Culture Fluids.” Analytical Chemistry, 92(24), 16274-16283 (2020).

34. D Chester, P Theetharappan, T Ngobili, M Daniele, AC Brown. “Ultrasonic Microplotting of Microgel Bioinks.” ACS Applied Materials & Interfaces, 12(42), 47309-7319, (2020).

35. Teng Su, Ke Huang, Kyle G Mathews, Valery F Scharf, Shiqi Hu, Zhenhua Li, Brianna N Frame, Jhon Cores, Phuong-Uyen Dinh, Michael A Daniele, Frances S Ligler, Ke Cheng . “Cardiac Stromal Cell Patch Integrated with Engineered Microvessels Improves Recovery from Myocardial Infarction in Rats and Pigs.” ACS Biomaterials Science & Engineering, 6(11), 6309-6320, (2020).

36. John D Schneible, Ashlyn T Young, MA Daniele, S Menegatti. “Chitosan Hydrogels for Synergistic Delivery of Chemotherapeutics to Triple Negative Breast Cancer Cells and Spheroids.” Pharmaceutical Research, 37(7), 1-11, (2020).

37. Kaitlyn Bacon, Ashton Lavoie, Balaji M Rao, Michael Daniele, Stefano Menegatti. “Past, present, and future of affinity-based cell separation technologies.” Acta Biomaterialia, 112, 29-51 (2020).

38. Halston E Deal, Ashley C Brown, Michael A Daniele. “Microphysiological systems for the modeling of wound healing and evaluation of pro-healing therapies.” Journal of Materials Chemistry B, 8 (32) 7062-7075 (2020).

39. Kevin Day, John D Schneible, Ashlyn T Young, Vladimir A Pozdin, George Van Den Driessche, Lewis A Gaffney, Raphael Prodromou, Donald O Freytes, Denis Fourches, Michael Daniele, Stefano Menegatti. “Photoinduced reconfiguration to control the protein-binding affinity of azobenzene-cyclized peptides.” Journal of Materials Chemistry B, 8(33) 7413-7427 (2020).

40. John D Schneible, Kaihang Shi, Ashlyn T Young, Srivatsan Ramesh, Nanfei He, Clay E Dowdey, Jean Marie Dubnansky, Radina L Lilova, Wei Gao, Erik Santiso, Michael Daniele, Stefano Menegatti. “Modified graphene oxide (GO) particles in peptide hydrogels: a hybrid system enabling scheduled delivery of synergistic combinations of chemotherapeutics.” Journal of Materials Chemistry B,  8(17) 3852-3868 (2020).

41. Gary W Hunter, Sheikh Akbar, Shekhar Bhansali, Michael Daniele, Patrick D Erb, Kevin Johnson, Chung-Chiun Liu, Derek Miller, Omer Oralkan, Peter J Hesketh, Pandiaraj Manickam, Randy L Vander Wal. “Editors’ choice—critical review—a critical review of solid state gas sensors.” Journal of the Electrochemical Society, 167(3) 037570 (2020).

42. M. YokusΣ, T. Songkakul, V.A. Pozdin, A. Bozkurt and M.A. Daniele.* “Wearable Multimodal Biosensor System for Continuous Monitoring of Sweat Metabolites.” Biosensors and Bioelectronics, 153, 112038 (2020).

43. J. Yuen, V. Pozdin, I. Giles, A. Young, J. Naciri, S. Trammell, P. Charles, D. Stenger, M.A. Daniele.* “Perylene-diimide-based n-type semiconductors with enhanced air and temperature stable photoconductor and transistor properties.” Dyes and Pigments, 174, 108014 (2020).

44. A. YoungΣ, K. RiveraΣ, P. ErbΣ and M.A. Daniele.*§ “Monitoring of Microphysiological Systems: Integrating Sensors and Real-Time Data Analysis Toward Autonomous Decision Making.” ACS Sensors (2019). COVER FEATURE

45. K. RiveraΣ, M. YokusΣ, P. ErbΣ, V.A. Pozdin and M.A. Daniele.*§ “Measuring and regulating oxygen levels in microphysiological systems: Design, material, and sensor considerations.” Analyst, 144, 3190-3215 (2019).

46. M.D. WilkinsΣ, B.L. TurnerΣ, K.R. RiveraΣ, S. Menegatti and M.A. Daniele.*§ “Quantum dot enabled lateral flow immunoassay for detection of cardiac biomarker NT-proBNP.” Sensing and Bio-Sensing Research, 21, 46-53 (2018).

47. K.R. RiveraΣ., Vladimir A. Pozdin, Ashlyn T. YoungΣ, Patrick DΣ. Erb, Natalie A. Wisniewski, Scott T. Magness, and M.A. Daniele.*§ “Integrated phosphorescence-based photonic biosensor (iPOB) for monitoring oxygen levels in 3D cell culture systems.” Biosensors and Bioelectronics, 123, 131-140, (2019).

48. T. Su†, Ke Huang†, M.A. Daniele†§, Michael Taylor Hensley, Ashlyn YoungΣ, Junnan Tang, Tyler A. Allen et al. "Cardiac Stem Cell Patch Integrated with Microengineered Blood Vessels Promotes Cardiomyocyte Proliferation and Neovascularization After Acute Myocardial Infarction." ACS Applied Materials & Interfaces, (10)39, 33088-33096, (2018).

49. Zwarycz, Bailey, Adam D. Gracz, Kristina R. RiveraΣ, Ian A. Williamson, Leigh A. Samsa, Josh Starmer, M.A. Daniele§, Luisa Salter-Sid, Qihong Zhao, and Scott T. Magness. "IL22 Inhibits Epithelial Stem Cell Expansion in an Ileal Organoid Model." Cellular and Molecular Gastroenterology and Hepatology, (2018).

50. A.T. YoungΣ, N. Cornwell and M.A. Daniele.*§ “Neuro-Nano Interfaces: Utilizing Nano-Coatings and Nanoparticles to Enable Next-Generation Electrophysiological Recording, Neural Stimulation, and Biochemical Modulation.” Advanced Functional Materials, 28(12), (2018).

51. K.A. DiVito†, M.A. Daniele†*§, S.A. Roberts, F.S. Ligler and A.A. Adams.* “Microfabricated Blood Vessels Undergo Neoangiogenesis.” Biomaterials, 138, 142-152 (2017).

52. K.A. DiVito†, M.A.Daniele†*§, S.A. Roberts, F.S. Ligler and A.A Adams*, “Characterizing Microfabricated Human Blood Vessels Created via Hydrodynamic Focusing.” Data-In-Brief 14, 156-162 (2017).

53. J.D. Yuen, S.A. Walper, B.J. Melde, M.A. Daniele*§ and D.A. Stenger. “Organic Electrochemical Transistor Sensor Decals Enabled by Ultrathin Microbial Nanocellulose.” Scientific Reports, 7 (2017).

54. Bolin Chen, Nathaniel T Garland, Jason Geder, Marius Pruessner, Eric Mootz, Allison A. Cargill, Anne Leners, Granit Vokshi, Jacob Davis, Wyatt Burns, M.A. Daniele§, Joshua M. Kogot, Igor L. Medintz, and Jonathan C. Claussen*. “Platinum Nanoparticle Decorated SiO2 Microfibers as Catalysts for Micro Unmanned Underwater Vehicle Propulsion.” ACS Applied Materials & Interfaces, 8(45), 30941-30947 (2016).

55. N.J. Alves, K.B. Turner, K.A. DiVito, M.A. Daniele§ and Scott A. Walper. “Affinity purification of bacterial outer membrane vesicles (OMVs) utilizing a His-tag mutant.” Research in Microbiology, 168(2), 139-146 (2016).

56. K. Stover, Tomoki Fukuyama, Ashlyn T. YoungΣ, M.A. Daniele§, Rebecca Oberley, James D. Crapo and Wolfgang Baumer*. “Topically applied manganese-porphyrins BMX-001 and BMX-010 display a significant anti-inflammatory response in a mouse model of allergic dermatitis.” Archives of Dermatological Research, 1-11 (2016).

57. M.A. YokusΣ and M.A. Daniele.*§ “Skin Hydration Sensor for Customizable Electronic Textiles.” MRS Advances. 1-6, doi:10.1557/adv.2016.540 (2016).

58. S.A. Roberts, Kyle A. DiVito, Frances S. Ligler, Andre A. Adams and M.A. Daniele*§ “Microvessel manifold for perfusion and media exchange in three-dimensional cell cultures.” Biomicrofluidics, 10 (5), 054109 (2016).

59. T. NgobiliΣ and M.A. Daniele.*§ “Nanoparticles and direct immunosuppression.” Experimental Biology and Medicine, 241(10), 1064-1073 (2016).

60. R. Jenkins, Y.P. Bandera, M.A. Daniele, L.L. Ledford, A. Tietje, A.A. Kelso, M.G. Sehorn, Y.Wei, M. Chakrabarti, S.K. Ray and S.H. Foulger. “Sequestering survivin to functionalized nanoparticles: a strategy to enhance apoptosis in cancer cells.” Biomaterials Science, 4(4), 614-626 (2016). COVER FEATURE

61. N.J. Alves, Kendrick B. Turner, M.A. Daniele, Eunkeu Oh, Igor L. Medintz, and Scott A. Walper. “Bacterial Nanobioreactors: Directing Enzyme Packaging into Bacterial Outer Membrane Vesicles.” ACS Applied Materials & Interfaces, 7(44), 24963-24972 (2015).

62. M.A. Daniele*, Adrian J. Knight, Steven A. Roberts, Kathryn Radom and Jeffrey S. Erickson. “Sweet Substrate: A Polysaccharide Nanocomposite for Conformal Electronic Decals.” Advanced Materials, 27, 1600-1606 (2015). COVER FEATURE

63. M.A. Daniele*, Darryl A. Boyd, David Mott and Frances S. Ligler. “3D Focusing Microfluidics for Emerging Sensing Technologies.” Biosensors and Bioelectronics, (67), 25-34 (2015).

64. M.A. Daniele*, Darryl A. Boyd, Andre A. Adams and Frances S. Ligler. “Microfluidic Strategies for Design and Assembly of Microfibers and Nanofibers with Tissue Engineering and Regenerative Medicine Applications.” Advanced Healthcare Materials, (4)1, 11-28 (2015). COVER FEATURE

65. J.C. Claussen*, M.A. Daniele, Jason Geder, Marius Pruessner, Antti J. Mäkinen, Brian Melde, Mark Twigg, Jasenka M. Verbarg, and Igor L. Medintz. “Platinum-paper micromotors: An urchin-like nanohybrid catalyst for green monopropellant bubble-thrusters.” ACS Applied Materials & Interfaces, 6 (20), 17837-17847 (2014).

66. M.A. Daniele, Kathryn Radom, Frances S. Ligler and Andre A. Adams*. “Microfluidic Fabrication of Multiaxial Microvessels via Hydrodynamic Focusing.” RSC Advances, 4, 23440-23446 (2014).

67. M.A. Daniele*, Andre A. Adams, Jawad Naciri, Stella H. North and Frances S. Ligler. “Interpenetrating Networks Based on Gelatin Methacrylamide and PEG Formed Using Concurrent Thiol Click Chemistries for Hydrogel Tissue Engineering Scaffolds.” Biomaterials, 35, 1845-1856 (2014).

68. D. Boyd, M.A. Daniele, A. Adams* and F. Ligler. “Fabrication of microfibers by hydrodynamic shaping and photopolymerization.” Journal of Visual Experiments (86) e50958, doi:10.3791/50958 (2013).

69. Ragini Jetty, Yuriy Bandera, M.A. Daniele, David Hanor, Stephen Foulger*, Hsin-I Hung, Venkat Ramshesh, Megan Duperreault, Anna-Liisa Nieminen and John J. Lemasters. “Protein Triggered Fluorescence Switching of Near-Infrared Emitting Nanoparticles for Contrast-Enhanced Imaging.”  Journal of Materials Chemistry B, 1(36), 4542-4554 (2013). COVER FEATURE

70. M.A. Daniele, Stella H. North, Jawad Naciri, Peter B. Howell, Frances S. Ligler, Stephen H. Foulger, and Andre A. Adams.* “Rapid and Continuous Hydrodynamically Controlled Fabrication of Biohybrid Microfibers.” Advanced Functional Materials, 5(1), 114-119 (2013). COVER FEATURE

71. M.A. Daniele, Margaret L. Shaughnessy, Ryan D. Roeder, Anthony Childress, Yuriy P. Bandera, and Stephen H. Foulger.* “Magnetic Nanoclusters Exhibiting Protein-Activated Near-Infrared Fluorescence.” ACS Nano, 7(1), 203-213 (2013).

72. M.A. Daniele, Yuriy P. Bandera, Deepti Sharma, Parul Rungta, Ryan Roeder, Michael G. Sehorn, and Stephen H. Foulger*, “Substrate-Baited Nanoparticles: A Catch and Release Strategy for Enzyme Recognition & Harvesting.” Small, 8(13), 2083-2090 (2012). COVER FEATURE

73. M.A. Daniele, Yuriy P. Bandera, and Stephen H. Foulger*, “Manipulation of Fӧrster energy transfer of coupled fluorophores through biotransformation by Pseudomonas resinovorans CA10.” Photochemistry and Photobiology, 88, 129-134 (2012).